I363T Summary

KCNH2 I363T was found in 0 papers (see below) with a total of 0 carriers: 0 had LQT2. I363T is not present in gnomAD. I363T has been functionally characterized in 0 papers. This residue is located in a Mild_Hotspot region for LQT2.

In silico predictions, functional data (if available), and location in structure are equivalent to observing 8 individuals unaffected with LQT2 and 2 individuals affected with LQT2.


I363T Reported Clinical Data

PMID Year Carriers Unaffected LQT2 Other disease
Summary totals might not agree with the literature table because of duplicate patients, which were excluded from the total counts.

I363T Predictions

PROVEAN scores less than -2 are considered deleterious. REVEL scores higher than 0.5 or 0.75 is considered likely pathogenic (higher sensitivity with the former cutoff, higher specificity with the latter cutoff). A PolyPhen-2 score of 0.85 or greater is considered likely pathogenic. PAM scores reflect the chemistry difference between WT and variant amino acid (more negative being greater difference between the two). BLAST-PSSM reflects the evolutionary conservation of residue substitutions, more negative numbers indicate fewer observations of the specific substitution than is expected.

PAM Score REVEL Score PROVEAN Score Polyphen2 Score BLAST-PSSM
NA 0.767 -2.457 0.76 -1

I363T has 30 neighbors (found in individuals) within 15 ångströms

A residue within a folded protein on average has nearest neighbors that fall roughly into two shells: a "nearest" neighbor around 5-6 angstroms and a second shell around 11 angstroms. NOTE: some residues appear multiple times at different distances. This results from the fact that the functional Kv11.1 channel is a homotetramer and occasionally the same residue from multiple subunits is present within the 15A window. All variants shown in the rightmost column have been observed in at least one individual in the literature or gnomAD.

ResidueNumber Distance(Å) Variants
348 14.7
349 14.2
350 13.7
351 13.2 S351L
352 12.6
353 12 T353S
354 11.4
355 10.7 D355G
356 10.1 R356C R356H
357 9.3 E357D
358 8.5
359 7.6 I359V
360 6.6
361 5.4
362 3.8
364 3.8 K364X
365 5.4 E365G
366 6.6 R366Q R366X
367 7.6 T367S
368 8.5 H368Y
369 9.3 N369K
370 10.1
371 10.7
372 11.4
373 12
374 12.6
375 13.2
376 13.7 Q376R Q376sp
377 14.2
378 14.7